Information

Click on a row to explore the results for that model. When you wish to explore a different model, then select the new result row and the tabs will be updated.

Demo Video

OHDSI Covid-19 Simple Models Results

The Observational Health Data Sciences and Informatics (OHDSI) international community is hosting a COVID-19 virtual study-a-thon this week (March 26-29) to inform healthcare decision-making in response to the current global pandemic. The preliminary research results on this web-based application are from a retrospective, real-world, observational study in support of this activity and will subsequently be submitted to a peer-reviewed, scientific journal.

This shiny application contains the results of the simple models that were developed to assess the performance loss that occurs on various OHDSI COVID19 prediction problems.

During manuscript development and the subsequent review period, these results are considered under embargo and should not be disclosed without explicit permission and consent from the authors.

Below are links for study-related artifacts that have been made available as part of this study:

Protocol: link

Development Status: Under Development

Study lead: Jenna Reps, Ross Williams, Peter Rijnbeek

Study lead forums tag: jreps, RossW, Rijnbeek

App Instructions

Click on the 'Summary' button in the left hand menu to see a table where each row corresponds to a result where a model has been valdiated on some data. Clicking on a row then populates the 'Performance' and 'Model' buttons with that specific result (you can view more details of the evaluation that the row corresponds to). See the 'Help' button for a youtube video demostrating the shiny app.

Database Information

  • Development Database: OptumDoD, MDCR
  • Validation Databases: AUSOM, CCAE, MDCD, MDCR, JMDC, IPCI, optumEhr, optumDoD, Tufts, SIDIAP, HIRA, AU_ePBRN

Abstract

Below is the abstract of the manuscript that summarizes the findings:

Background:

Methods:

Results:

Discussion:

Packages

  • OHDSI simple model validation: link
  • Existing model validation: link

Data Information #

The following databases were used in this study:

Database Name Country Type Years
OptumDoD Optum® De-Identified Clinformatic Data Mart Database – Date of Death (DOD)     USA     Claims     2000-2019
AUSOM     Ajou University School of Medicine Database Korea     EHR     1999-2018
CCAE     IBM MarketScan® Commercial Database     USA     Claims 2000-2019
MDCD     IBM MarketScan® Multi-State Medicaid Database     USA     Claims 2006-2019
MDCR     IBM MarketScan® Medicare Supplemental Database     USA     Claims 2000-2019
JMDC     Japan Medical Data Center     Japan     Claims     2000-2019
IPCI     Integrated Primary Care Information Netherlands     GP     2006-2020
optumEhr     Optum® de-identified Electronic Health Record Dataset     USA EHR     2006-2019
Tufts - CLARET     Clinical Academic Research Enterprise Trust (CLARET) USA     EHR     2006-2020
SIDIAP     The Information System for Research in Primary Care (SIDIAP) Spain     GP     2016-2020
HIRA     Health Insurance and Review Assessment Korea     Claims     2013-2020
AU_ePBRN     electronic Practice Based Research Network Australia     EHR (GP + Hospital) 2012-2019

All databases obtained IRB approval or used deidentified data that was considered exempt from IRB approval.

Filters

Model Settings: help

Population Settings: help

Covariate Settings: help

Binary

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Measurements

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Covariates

Model Table